Training on Whole Genomics Sequencing and Analysis

Genomics Home

Jointly organized by:
The University of Trans-disciplinary Health Sciences & Technology (TDU)
Bengaluru Genomics Centre (BGC)

Program Co-ordinators

Training Theme

  • Genomics is a recent technological revolution in life science that transformed our understanding of life’s genome landscape
  • The purpose of this training workshop is to get a deeper understanding in Next-Generation Sequencing (NGS) technology with a special focus on whole genome sequencing and analysis.
  • To teach the fundamentals of NGS workflow from sample prep to whole genome sequencing to analysis to manuscript writing and patent application
  • Globally huge demand and opportunities in genomics research and industry

Objectives

  • High quality Training and capitalizing human resources to carry out Next Generation Sequencing and Big-Data Analysis
  • Carryout high-end research on genomic and functional genomics to solve the big problems

Dates

March 12-16, 2018.

Target Audience

Students and Faculty/Scientists from Academia and Industry from Life Sciences, Biotechnology, Genetics, Computer Science, Genomics, Medicine, Agriculture, Environment, Computer Science and other disciplines.

Recommended

This Certificate Course (3 Credits) is Transdiscplinary in nature and TDU strongly recommends this module for Undergraduates, Masters and PhD students

Computer Support

  • We will provide computers with software installed for the participants.
  • Participants are encouraged to bring their own laptops with UBUNTU system.

Schedule

Whole Genome Sequencing and Analysis
Day 1
  • In-depth knowledge on whole genome sequencing
  • Genomic experimental plan in Plants, Animals and Microbes
  • How to estimate genome size and ploidy of an organism
Day 2
  • Genomic DNA purification from Plant, Animal and Microbial and Environmental source
  • NGS library construction and validation
  • Whole genome sequencing by NGS platforms (short and long reads)
Day 3
  • NGS data formats and structure
  • Challenges in Big Data analysis of prokaryotes and eukaryotes
  • WGS analyses pipelines for De novo and Reference based assembly, annotations, and marker prediction.
Day 4
  • Comparative whole genome analysis
  • Metagenomes analysis
Day 5
  • Data submissions & graphical representations
  • NGS data submission to NCBI
  • Essentials for high-impact publication(s)/patent(s)

Speakers

Dr. Malali Gowda

Dr. Malali Gowda TDU

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Dr. Pruthvi Chakravarti

Dr. Pruthvi Chakravarti Bengaluru Genomics Centre

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Chowdry Vinay Kumar

Chowdry Vinay Kumar Bengaluru Genomics Centre

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Arun Kumar K P

Arun Kumar K P Centre for DNA Fingerprinting & Diagnostics

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M V Channabyre Gowda

M V Channabyre Gowda GKVK

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R Srivatsan

R Srivatsan Institute of Bioinformatics and Applied Biotechnology

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Dushyant Singh Baghel

Dushyant Singh Baghel Nucleome Informatics

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Workshop Documents

Schedule

Sponsors

Supporters

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© 2018 TDU, Bengaluru.